PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40618 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YB | ||||||||
Protein Properties | Length: 179aa MW: 20124.4 Da PI: 4.7591 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 42 | 2.2e-13 | 26 | 120 | 7 | 96 |
NF-YB 7 flPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 lP + v r++k l +++ is +d+ e + fi ++++ a+d c++ kr+tin++d++ al ++ f +++epl++ l+ +r+ +++ OIT40618 26 GLPKTIVRRLVKDKLSqlsTDTDISllRDSLLAFSESARIFIHYLSATANDICKESKRQTINAEDVFKALEEIEFPEFIEPLRASLEVFRQRNSK 120 5777778888887654111566666446777788999*****************************************************97765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MAEIEKQKDK EKEKLPAATV QIEQEGLPKT IVRRLVKDKL SQLSTDTDIS LLRDSLLAFS 60 ESARIFIHYL SATANDICKE SKRQTINAED VFKALEEIEF PEFIEPLRAS LEVFRQRNSK 120 RKSGSSKSTE SNKKAKLKEP VENGKGKMKE QPSDTENEDG QAAEQPSDNE DEDGQAEGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 3e-29 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40618 |