PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40592
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 453aa    MW: 51085.5 Da    PI: 5.5938
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40592genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS303.26.2e-93574502373
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaNqa 101
               ++lL++cA+a++s+d +laq++L+ l+++a pdgd++qRla  f++AL  r a+   +++k l+++ +++++ ++ ++  l  f++++P+++f++ +aN a
  OIT40592  57 EQLLVHCANAIESNDPTLAQQILWVLNNIAPPDGDSNQRLACGFLRALIVRAAK--IGTCKLLTANLNHSMEtHKFSIIELAGFVDLTPWHRFGFTAANGA 155
               79****************************************************..667777766666554424455555555****************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrledlele 192
               Ileaveg + vHi+Df++++++Q p+L++a+++R egpp +++T+ g+ e        ++ee+g +L +fA++ +v +ef+v+            +++ +e
  OIT40592 156 ILEAVEGYSIVHIVDFSLTHCMQIPTLIDAISTRLEGPPLVKLTVAGATEDLppmLDLSYEELGAKLVNFARSRNVMMEFRVIpssssdgF----SNV-IE 251
               ************************************************776698888999**********************977633333....333.66 PP

      GRAS 193 eLrvkp......gEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
               +Lrv++      gEal++n++++lh+++              + + s++s r+ +Lk++++l P++vv+v+++ad +s++++ r+ +a++y +  +d++++
  OIT40592 252 QLRVQNlirpenGEALVINCHMMLHYIPeettvlsprfpldqSINSSVSSFRTMFLKAIRNLDPTIVVLVDEDADFTSNNLVCRLRSAFNYLWIPYDTMDT 352
               666666666678****************************763344555688************************************************* PP

      GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                lpr s++r+++E+  + ++i+nv+a+eg +r er e +++W +r+++a F++  +se+ ++++k +l +++  g+ ++ +++ +vl+Wk++++v++ aW
  OIT40592 353 FLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRLERLEPKSQWVQRMRNANFRSSGFSEDSVSEVKNMLDEHA-AGWGLKRDEEDIVLTWKGHNVVFAIAW 450
               ***************.********************************************************.999************************ PP

Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MMQFTESLPP SFHQQVSPIF SSLMLNKNDN QIQRARPWPG FPTSKNLGTI GDANCMEQLL  60
VHCANAIESN DPTLAQQILW VLNNIAPPDG DSNQRLACGF LRALIVRAAK IGTCKLLTAN  120
LNHSMETHKF SIIELAGFVD LTPWHRFGFT AANGAILEAV EGYSIVHIVD FSLTHCMQIP  180
TLIDAISTRL EGPPLVKLTV AGATEDLPPM LDLSYEELGA KLVNFARSRN VMMEFRVIPS  240
SSSDGFSNVI EQLRVQNLIR PENGEALVIN CHMMLHYIPE ETTVLSPRFP LDQSINSSVS  300
SFRTMFLKAI RNLDPTIVVL VDEDADFTSN NLVCRLRSAF NYLWIPYDTM DTFLPRGSKQ  360
RQWYEADICW KIENVIAHEG LQRLERLEPK SQWVQRMRNA NFRSSGFSED SVSEVKNMLD  420
EHAAGWGLKR DEEDIVLTWK GHNVVFAIAW VPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-180GRAS family protein