PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40592 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | GRAS | ||||||||
Protein Properties | Length: 453aa MW: 51085.5 Da PI: 5.5938 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 303.2 | 6.2e-93 | 57 | 450 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaNqa 101 ++lL++cA+a++s+d +laq++L+ l+++a pdgd++qRla f++AL r a+ +++k l+++ +++++ ++ ++ l f++++P+++f++ +aN a OIT40592 57 EQLLVHCANAIESNDPTLAQQILWVLNNIAPPDGDSNQRLACGFLRALIVRAAK--IGTCKLLTANLNHSMEtHKFSIIELAGFVDLTPWHRFGFTAANGA 155 79****************************************************..667777766666554424455555555****************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrledlele 192 Ileaveg + vHi+Df++++++Q p+L++a+++R egpp +++T+ g+ e ++ee+g +L +fA++ +v +ef+v+ +++ +e OIT40592 156 ILEAVEGYSIVHIVDFSLTHCMQIPTLIDAISTRLEGPPLVKLTVAGATEDLppmLDLSYEELGAKLVNFARSRNVMMEFRVIpssssdgF----SNV-IE 251 ************************************************776698888999**********************977633333....333.66 PP GRAS 193 eLrvkp......gEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273 +Lrv++ gEal++n++++lh+++ + + s++s r+ +Lk++++l P++vv+v+++ad +s++++ r+ +a++y + +d++++ OIT40592 252 QLRVQNlirpenGEALVINCHMMLHYIPeettvlsprfpldqSINSSVSSFRTMFLKAIRNLDPTIVVLVDEDADFTSNNLVCRLRSAFNYLWIPYDTMDT 352 666666666678****************************763344555688************************************************* PP GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 lpr s++r+++E+ + ++i+nv+a+eg +r er e +++W +r+++a F++ +se+ ++++k +l +++ g+ ++ +++ +vl+Wk++++v++ aW OIT40592 353 FLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRLERLEPKSQWVQRMRNANFRSSGFSEDSVSEVKNMLDEHA-AGWGLKRDEEDIVLTWKGHNVVFAIAW 450 ***************.********************************************************.999************************ PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence |
MMQFTESLPP SFHQQVSPIF SSLMLNKNDN QIQRARPWPG FPTSKNLGTI GDANCMEQLL 60 VHCANAIESN DPTLAQQILW VLNNIAPPDG DSNQRLACGF LRALIVRAAK IGTCKLLTAN 120 LNHSMETHKF SIIELAGFVD LTPWHRFGFT AANGAILEAV EGYSIVHIVD FSLTHCMQIP 180 TLIDAISTRL EGPPLVKLTV AGATEDLPPM LDLSYEELGA KLVNFARSRN VMMEFRVIPS 240 SSSDGFSNVI EQLRVQNLIR PENGEALVIN CHMMLHYIPE ETTVLSPRFP LDQSINSSVS 300 SFRTMFLKAI RNLDPTIVVL VDEDADFTSN NLVCRLRSAF NYLWIPYDTM DTFLPRGSKQ 360 RQWYEADICW KIENVIAHEG LQRLERLEPK SQWVQRMRNA NFRSSGFSED SVSEVKNMLD 420 EHAAGWGLKR DEEDIVLTWK GHNVVFAIAW VPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-180 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40592 |