PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40470
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 296aa    MW: 33995.8 Da    PI: 8.0455
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40470genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.78.3e-312073255
   G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
              prlrWtp LH++F+ a+++LGG++kAtPk +l++m+v gLt++hvkSHLQ+YR+
  OIT40470 20 PRLRWTPHLHQCFLLAIQKLGGHDKATPKLVLQMMDVRGLTISHVKSHLQMYRS 73
              8****************************************************7 PP
2Myb_DNA-binding45.51.7e-142172148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+ +++ ++ a+++lGg+   t+k++ ++m   g+t  ++ks++q+y+
         OIT40470 21 RLRWTPHLHQCFLLAIQKLGGHdkaTPKLVLQMMDvRGLTISHVKSHLQMYR 72
                     89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGNCERNNGG VRQYRRSKVP RLRWTPHLHQ CFLLAIQKLG GHDKATPKLV LQMMDVRGLT  60
ISHVKSHLQM YRSMKSDVNW QAGGERSKGK EWVEDDHSHH QQEEVYHSCC NPTIETSESP  120
FPIYNPLPTK RDRLREAVAN YPYSGDDYMQ TSINYTKKSG VNNAEKKGIT GFRWQQICDT  180
QREAVDHLSH TASFSLHFFQ TSNAAFQQSQ DFKLSMQEDE NWKSSKKRKF ESLRNGEEEE  240
DSCRLSLSLS LHHPCAQRST TSASTNEAIS SYSDCNYWNS SSEKHSLNLD LSIALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.19e-32G2-like family protein