PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 480aa MW: 52725.3 Da PI: 7.6681 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.3 | 7.7e-29 | 221 | 279 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK +g+++prsYYrC+ a Cpv+k+v+r+ ed +++++tYeg+Hnh+ OIT40460 221 NDGCQWRKYGQKISRGNPCPRSYYRCSVApLCPVRKQVQRCVEDMSILITTYEGTHNHS 279 8***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence |
MEKILDNSIT ETVVARNQGN NHEEEAVGNS LKDDEFKSAI AEVNELRLEN SRLRTLLEQI 60 QKNYSSLQTR FSNICQPDHK KSVSPTCTTE NVAEEESELV SLRLGRSPSR NDQYKKDDKK 120 RHSCQSSDGL KLGLDYNIEV SKSDPIKPNT DPSPDNMLLE TKTVDARETS RPTSEVMRRG 180 DYEVSQPNPS VKRASDDEVS QPNVKRARVS VRTKCDYPTI NDGCQWRKYG QKISRGNPCP 240 RSYYRCSVAP LCPVRKQVQR CVEDMSILIT TYEGTHNHSL PIEATAMAST TSAAASMLLS 300 GSSSSQSSND LRNLPNNSKT TPLYLSNSPS NSNPFPTITL DFTTFPTTSS FTSFNFPSNF 360 QSNTGFLSNS FNFSSPEPDT LSKILGSGYV DYDSTTTLPY SKSLANIGSS NLGRPSPAQK 420 QFDQPVLGKN NNSSSSSSKL KENSSQQALT ETLTKAIASD PSFQSVLAAA ISSMVGATKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 9e-57 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40460 |