PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40427 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 29097 Da PI: 9.438 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40 | 7e-13 | 67 | 118 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ +hn++Er RR++ Ns ++ Lr+llP + + kK+s +++ ++ +YI +L OIT40427 67 KKLNHNANERDRRKNTNSLYSSLRSLLPAtD---QTKKVSLPATVARVLKYIPEL 118 6789*************************66...8999**************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MFAVSSPLFS NLGLSLADPT SQELNTIENP DSGTNIPRYH SSSRPSIVHS ESKNFNEFNN 60 GDYRIVKKLN HNANERDRRK NTNSLYSSLR SLLPATDQTK KVSLPATVAR VLKYIPELKK 120 EVERLTQKKE DLTLRSIPKK EYSADFNKQT IRGGIQNSLS VVSANKVGDR EIMIQISILK 180 TNKSSFAEAI SELEEEELLL LNASCFQTLQ DRVFYNLHFQ VQGTLPVNVQ ILRDKLLAYY 240 ETEDKFLLPW ISGSRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 6e-45 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40427 |