PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40318 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 150aa MW: 16995.8 Da PI: 5.5835 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.6e-18 | 22 | 65 | 1 | 48 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 ++y+GVr+++ +gr++AeIr p++ ++r++lg+f+taeeAa a++ OIT40318 22 TKYHGVRRRP-WGRYAAEIRNPNT---KQRHWLGTFDTAEEAALAYDI 65 69********.**********933...5******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MENILPQLHV RNLGRRSSRH STKYHGVRRR PWGRYAAEIR NPNTKQRHWL GTFDTAEEAA 60 LAYDISSIAF CGIENARTNF VYPFMSFPSP SSQPPPSPPP PPPTPPPSTP ELEVVENEED 120 DNDNDDDESL VIASILQSFR HSNTLDKLVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 9e-27 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40318 |