PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40199
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 135aa    MW: 15462 Da    PI: 4.8665
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40199genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-201767255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr ++ +g+++AeIrd ++ng   r++lg++ taeeAa+a+++a+ +++g
  OIT40199 17 RYRGVRKRP-WGKYAAEIRDTNKNG--VRVWLGTYVTAEEAARAYDKAAFEMRG 67
              6********.**********65676..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MDQDNSNDNK ESREEVRYRG VRKRPWGKYA AEIRDTNKNG VRVWLGTYVT AEEAARAYDK  60
AAFEMRGRFA VLNFPHEYPS FSSSSCPFSS SSSCSSSYSS VQNGNEVKEV IEFEYLDDKL  120
LEELLGLESD KTQFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.14e-22ERF family protein