PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT40069 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 21841.6 Da PI: 5.1382 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 54 | 103 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+ta+eAa a+++a+ l+g OIT40069 54 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAKEAALAYDQAAFTLHG 103 9*******.**********.3433.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MDYSQYNHLG FNENDTEDML LLNVLSEAGE NSFNNNLHVN KQETHSKENE GANYRGVRRR 60 PWGKYAAEIR DSTRNSVRVW LGTFDTAKEA ALAYDQAAFT LHGTMAVLNF PVDIVYQSLM 120 EMECGFEEGC SPVLILKKMH SMKKGKNNIH RKKKEKEMSF ENVLVLEDLG ADYLEEILRL 180 SEGCCDPSMS F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 156 | RKKKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-56 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT40069 |