PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39677 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24655.2 Da PI: 7.0175 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 28 | 76 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+++l+g OIT39677 28 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARALRG 76 8*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MRRGTAAAAP APVAGEPNGS GGSKEIRFRG VRKRPWGRFA AEIRDPWKKT RVWLGTFDSA 60 EDAARAYDAA ARALRGPKAK TNFPLPYAHH HQFNQGLNPN NDPFVDSRFY PQDNPIISQR 120 PTSSSMSSTV ESFSGPRPPP APRQQTTASY RKYPRSPPVV PDDCHSDCDS SSSVVDDGDC 180 EKENDNDNDN IASSSFRKPL LFDLNLPPPM DDAGADDLHC TALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 5e-24 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39677 |