PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39501
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 387aa    MW: 42962.4 Da    PI: 4.5743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39501genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-19116165255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  OIT39501 116 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDVEARRIRG 165
               69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MCGGAIISDY IAPSRTSRRL TAELLWGRSD LSKKQKNPNN YHSKPLRSQV VDLDDDFEAD  60
FQDFKDFSDD EAVQVDVKPF AFSASKSSTV EGSKAVKTVD SDKDADRSSK RKRKNQYRGI  120
RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDVEA RRIRGNKAKV NFPNEAPVPA  180
SRRTVKLNPQ KVLPKESLDS VQPDQTIINN MEDGCYDSLG FLEEKPMTKQ YGYEDGRSTS  240
GDTGFGSFAP SAGTDIYFNS DVGSNSFDCS DFCWGEPCAR TPEISSVLSA AIESNESQLV  300
EDDASPMKKV KSSPINPVAD DENTANKLSE ELSAFESQMK FLQIPYLEGN WDASVDTFLN  360
SSATQDGENA MDLWSFDDVP SLMGGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.36e-63ERF family protein