PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39336 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 189aa MW: 20087.3 Da PI: 4.6493 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.1e-18 | 17 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + ykG+r++k++g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g OIT39336 17 PVYKGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 68 68*******************9.....4489***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MSSPGASSSG GSSGRHPVYK GIRRRKSSGK WVSEIREPRS PNRIWLGTFP TPEMAAVAYD 60 VAALALKGRD VELNFPNSAS SLPVPATNSP RDIQAAAACA AAALGAAGDA LGAHGGVDNN 120 NNRPVSREIE NSTSWNNNEF IDEDLIFDMP NVIMNMAEGM LLSPPRFNLP DDDTTAAGYT 180 ADQDLWNCP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 5e-45 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39336 |