PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT39176

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 312aa MW: 35021.6 Da PI: 8.0193

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT39176	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	8.9e-28	171	225	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+ Wt++LHe+F e+v++LGG++kAtPk+il+lm+ L++++vkSHLQkYR+ OIT39176 171 KRRITWTHDLHEQFCECVNRLGGAKKATPKAILKLMNCYELSISNVKSHLQKYRV 225 689***************************************************7 PP
2	Myb_DNA-binding	38.4	2.8e-12	175	224	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 WT +++e++ ++v++lGg t+k+I + m+ ++ ++ks++qky+ OIT39176 175 TWTHDLHEQFCECVNRLGGAkkaTPKAILKLMNcYELSISNVKSHLQKYR 224 7***************99**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MLIKGVSGGD DSLYGILCKH LESRTSKFSA SESSRTIGQL CENSDDHIMP VCSHELEMYD 60 TASTSNNPLD KYDLADENFK SRDTLHSLVQ SSFSCRHKPE SSTPKGAKTS RNPYLSMAAR 120 GSQVGKDSFD SRIIKLCYVC QLEKKPQSPP NESVCISSNN VTPERVETTK KRRITWTHDL 180 HEQFCECVNR LGGAKKATPK AILKLMNCYE LSISNVKSHL QKYRVTCDVT VSPKDAVKTE 240 GSPGTNSFPA HAPETCPQIL EALKLQISVQ QSLYEQLEIQ RSLQLRIEEQ AKQLREMFDR 300 QAETNKNFQH SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	4e-38	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT39176