PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39129 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 23797.8 Da PI: 9.0368 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++kGVr++ +g+Wv+eIr+p kr++lg+f taeeAa+a+++a+ ++g OIT39129 5 KKFKGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDEAAILMNG 55 59*****999.**********8.....335**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVQSKKFKGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDEAA ILMNGQVAKT 60 NFPIVKENDV NNSNDKKFPL SSASTLSTVL NAKLRKCCKD PAPSMTCLRL DNDNCHIGVW 120 QKRSGKNSGS NWITKVELGK KEEPHQSHES MNSWSLSSSS GSTSSSSSSE LGINKPLDEE 180 NRAAMQMVEE LLNCNSPFSS APINDLSPSF SNFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25390.2 | 5e-62 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39129 |