PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39064
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 319aa    MW: 35954.4 Da    PI: 7.2093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39064genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19165214255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+ta+ Aa+ +++a++k++g
  OIT39064 165 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTADAAARTYDEAALKFRG 214
               7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MCMANSRDKI SNRRRHEDRD RDDNYNVLES MFSGNINRER EISVMVSALT NIVVAGEDHR  60
VINNQVLSAD ESGAAENNFG SAFSSVSWGV GEKRGRNEEQ SGHHFLHFPT SDIRSSGGEG  120
TRIRTITSST PTAEATFICT STNDHQNSSN DQSNGGDNSS QSRRRYRGVR QRPWGKWAAE  180
IRDPYKATRV WLGTFDTADA AARTYDEAAL KFRGSKAKLN FPEKVKLLPS PVLSDSPNTL  240
YSVSSSPDPI VHTSLYRPNF IGYPLRDDEP IVHTSQYRSN FIERPLKDHT THHQALNNNT  300
DLNAQVFMND DEFHRLHVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.12e-17ERF family protein