PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38757
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 304aa    MW: 33155.1 Da    PI: 6.9478
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38757genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.7e-30100153155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  OIT38757 100 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 153
               59*******************.********************************8 PP
2Myb_DNA-binding48.12.6e-15102152148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
         OIT38757 102 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 152
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MREEDSNWFA KWEEELPSPE ELMPLSQTLI TPDLALAFDI QNPNSPLPKT HHQQHQQTTP  60
PLGVHTPSSH PNSSAEFDSA ELGGTAGSGG VDEPARTLKR PRLVWTPQLH KRFVDAVAHL  120
GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG LSNGGSGNGN GSIPGLSGGG  180
MVDTATDQLF ASSPVPPHFL HPGRGNSDHY MPFVPVAAMH HHHQMAAVVG HPPQLQQQYR  240
HFGSPPNGQF EVPFLSRQSH QQVQRMGTSV HSSSPVVPSY VEDLESATAA NGRKVLTLFP  300
TGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.15e-84G2-like family protein