PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38728
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 271aa    MW: 30647.5 Da    PI: 7.6346
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38728genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY901.9e-28189245459
               SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   4 gynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++WrKYGqK++kgs fpr+YYrC+++ +C ++k++e+s +dp+++++ Y+geHnh+
  OIT38728 189 TWAWRKYGQKPIKGSLFPRNYYRCSTSkDCDARKHIEKSPRDPNLFIVAYSGEHNHP 245
               699*********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGDNNWDLGV VERSYNIRPS HDTNKVEVPS LGLESLTFGN DDDWNFFHSL LDDDRDDDIM  60
TFESLADVFS RDEQKPDAPH QLSFNSVPIA DEVKNDQNDQ QLLLQPIQLP AQQTQPIPPP  120
PPAVAAVAAA FVPAAAPQQL NPRPVLKRAK VRPTITVPIR NPIIQIRRRK NQPGKTVHEV  180
SQEELIDFTW AWRKYGQKPI KGSLFPRNYY RCSTSKDCDA RKHIEKSPRD PNLFIVAYSG  240
EHNHPPPANR CTLSDSTNSK KLPKGINIVP R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-33WRKY family protein