PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT38711

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 269aa MW: 31339.6 Da PI: 5.0986

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT38711	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.8	9.3e-12	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE e ++ ++l ++ W+ Ia++++ gRt++++k++++++l OIT38711 67 RGPFSIEERETVIKKYQELWNR-WSEIAARLP-GRTDNEVKNFYHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MVACLGGPST CTSTATEKYK HGEDKEGAWS PEEDQKLRAY IMRYGIWNWR HMPKFAGLIH 60 SNPDVKRGPF SIEERETVIK KYQELWNRWS EIAARLPGRT DNEVKNFYHT HLKEHLGPKY 120 DAPLKSTRAR NDKRVVKKTK GNERTNADKR SPDHVSSSDS STSIITCEEN QTMDVAMNLS 180 QTYQDWYNIV DQPISNMEIR PVILENNPDD GATYNSNCQQ LHDQFEYSHD ISEYFSSFDS 240 IDQFDMSSFW FDELWDAETS EFLRDVINN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	5e-31	MYB family protein

Link Out ? help Back to Top
Ensembl	OIT38711