PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT38545 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 89aa MW: 10010.2 Da PI: 7.5427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.6 | 6.3e-08 | 17 | 38 | 2 | 24 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse 24 +y+GVr+ + +g+++AeIrdp+ OIT38545 17 HYRGVRQSP-WGKFAAEIRDPNR 38 8*******9.**********733 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 89 aa Download sequence |
MKQVQNVEIS NDTEKKHYRG VRQSPWGKFA AEIRDPNRKG NQDEDERVLP TPAAAPLTPS 60 SWSATWDSGD GKGIFEVPPL SPLWPILRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47230.1 | 1e-12 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT38545 |