PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38538
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 280aa    MW: 31135.8 Da    PI: 7.063
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38538genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.61.3e-23126185258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +Dgy+WrKYG K + g+++pr YYrC+ +   +C+++k v+rs+++ +v+e++Y g+H +
  OIT38538 126 EDGYSWRKYGHKYILGAKHPREYYRCARRrlsSCTATKMVQRSETEASVFEVIYGGSHSC 185
               7**************************998999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGEENCWERE VVITELTKGR ELMCQLQKQF DPMKQEVCQY LSVEILSSYD KALSLLNGTA  60
LSGMNKGKQI SNPAPSSSTG KLESLHLLAD ASTKSSDRPC NSRKRKMVSR RTEYVHARSG  120
EEVPPEDGYS WRKYGHKYIL GAKHPREYYR CARRRLSSCT ATKMVQRSET EASVFEVIYG  180
GSHSCGQESK LQQNGELVAA LTKETQCDEV GRGGEISESY FTEMVSTPNT SFNNSSTGIV  240
NSNSILNMTN SDIMTTPTSA HAEGNSSAED LWTTFFSTLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107SRKRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-33WRKY family protein