PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38536
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 399aa    MW: 44914.1 Da    PI: 8.0302
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38536genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.28.2e-24126185258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +Dgy+WrKYGqK++ g+++pr YYrC+ +   +C ++k v+rs+++p ++e++Y ++H +
  OIT38536 126 EDGYSWRKYGQKPILGAKYPREYYRCARHhlsKCIATKMVKRSDTEPPIFEVIYGESHSC 185
               7**************************88889**************************98 PP
2AP247.25.6e-15338386355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               y+GVr+++ + +W AeIrdp   + r +r++lg+f+   +Aa a++aa+ +++g
  OIT38536 338 YRGVRQRP-WRKWSAEIRDP---N-RaARVWLGTFDNSHDAAVAYDAAAYRFYG 386
               9*******.**********8...3.47***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MGEENCWERE VVITELTKGR ELMCQLQKQF DPMKQEVCQY LSVEILSSYD KALSLLNGTA  60
LSIMSKGKQI MNSAPSSSTD KLESPHLPVD SSTKSYDRPS NSRKRKMISR RTEYVYARSG  120
AEVPPEDGYS WRKYGQKPIL GAKYPREYYR CARHHLSKCI ATKMVKRSDT EPPIFEVIYG  180
ESHSCGQESK NQNEELPAPV LTVLTKEKQS EEVGRGGEIS ESDIADMVST PNNSFNNSST  240
GVVFSSNSNS NSLFNITNSD FISTPTSSPH PDWNSLSLDD YTTRLTALLN DGLENASCTY  300
KGVDFISTPT SDRNLSLDVT TSLTTLSNSA PENARRAYRG VRQRPWRKWS AEIRDPNRAA  360
RVWLGTFDNS HDAAVAYDAA AYRFYGKNAR LNFPERYMK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107SRKRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-30WRKY family protein