PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38432
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 298aa    MW: 34184.6 Da    PI: 5.0769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38432genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.9e-2098148155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++++GVr+++ +g+W+AeIrdp++   ++r++lg+f taeeAa  +++a+ +++g
  OIT38432  98 KKFRGVRQRP-WGKWAAEIRDPVK---KTRIWLGTFETAEEAAMVYDQAAIQIRG 148
               59********.**********654...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEGKFSQSIK KCVVHKSINT KHENKLTPKV VRICYTDCDA TDSSSDDDFD DKERKRVKKY  60
VTEIRLEKKV SHGDVKKPSN LSEKKKKMMD VKTNENVKKF RGVRQRPWGK WAAEIRDPVK  120
KTRIWLGTFE TAEEAAMVYD QAAIQIRGPD ALTNFMKPPV KKESVITSVS DYDSTGESEN  180
LCSPTSVLRH NDNNVGVTAT KIATNEEMKD DRKRMEFAMR NDQNGILLDD NLPLMDQCFL  240
KDFFDFRSPS PLMDDVLPVF CDDIDFPNVD FLDGNGILDE DLESCTWDVN DFLEDHCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-40ERF family protein