PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT38352 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 301aa MW: 33040.8 Da PI: 6.9772 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.7 | 1.7e-30 | 95 | 148 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl OIT38352 95 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 148 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 97 | 147 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ OIT38352 97 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 147 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MREEDSNWFA KWEEELPKPE ELMPLSQTLI SPDLAIAFDI ANPTSPNNPP NKQQQQQTQI 60 PQSSQQQPNS SAEFESSELN GLGGGGDEPA RTIKRPRLVW TPQLHKRFVD AVAHLGIKNA 120 VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSNGG SGGNSGQSLS GAGVDSAMDN 180 LFASSPVPAH FLHPAGRGNP DQFLPFVPVS SMQHHNHHMG VVVGHHHPQV QQQYRQFGSP 240 ANGHFDHHPF LSRQSQQQVQ RMGTSVHNGS PVVSPYVDDV DSSAVPVNGR KVLTLFPTGD 300 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 2e-67 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT38352 |