PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38268
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 267aa    MW: 30025.2 Da    PI: 8.4159
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38268genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-18100150256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr +  +g+Wv+eIr p++   + r++lg++ tae+Aa+a++ a+++++g+
  OIT38268 100 TYRGVRKRN-WGKWVSEIRQPRK---KSRIWLGTYATAEMAARAHDVAALAIKGH 150
               69****887.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MNDLEEQINL ETPAHYHDFS TSFSSSNGLN SPSTITSTTT TSSSSSSSSL KRNVKISIEY  60
KFKKISKKVQ EFNYKGNDHI GGTDENRKRR KKEGDDKHPT YRGVRKRNWG KWVSEIRQPR  120
KKSRIWLGTY ATAEMAARAH DVAALAIKGH SAYLNFPYLA DQLPRPASTS PKDIQIAAAK  180
AAATTFPEDM KSRAESSHEI SNPIEIQNSC SSTDLSTDND DTFFNLPDLS LNKVDQIGRY  240
SDPISTWQQV GADVGFWLEE PFLWESH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793RKRRKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-48ERF family protein