PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37577
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HSF
Protein Properties Length: 485aa    MW: 54594.6 Da    PI: 6.0625
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37577genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.83.9e-34141062103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y++++d ++++++sws+++nsfvv++  ef++++LpkyFkh+nf+SFvRQLn+Yg++kv+ +          weF+++ F +g+k+ll++i 
      OIT37577  14 FLCKTYDMVDDLSTDSVVSWSKSNNSFVVWNVLEFSRDILPKYFKHNNFSSFVRQLNTYGYRKVDPDC---------WEFANEGFLRGHKHLLKTIS 101
                   9***************************************************************9987.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k +
      OIT37577 102 RRKPS 106
                   **976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MEAIHEIGNS PPPFLCKTYD MVDDLSTDSV VSWSKSNNSF VVWNVLEFSR DILPKYFKHN  60
NFSSFVRQLN TYGYRKVDPD CWEFANEGFL RGHKHLLKTI SRRKPSQMQV HQDTASQVQS  120
VSAESCVEVG KFGIEEEVER LKRDKNVHME ELVKLKQQQQ ATDHCLENVG QRLHLMEQRQ  180
QQTMSFLAKA LQSPGFIAEL IHQQNEGNRR IPGMKKKRRF PDQEEEIYAG KPVCTMHDRQ  240
IVRYQPLMNE AAKALLQKIL KTNASGRLET KVKNTNGFLT NHGHAFENTL DSAGICSRTA  300
GVTLPQLPTS SQSHLTLDSG FPFNSNLSAI PEIQYSPSLV PVEAKVPHFP GLNALNFQTD  360
HVLPEVSEGY GINTLDNFGI TDLKRLGTGD LPDIDRIQGI VDGVTSVLPD RFSTDTDIDI  420
FLDEMSKLPG INDIFWDQIL SASPLTGDKH EIGSLALEDG LAKEDDVPGI QESAFDKKKH  480
MSYLT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215219KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-124HSF family protein