PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37562
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 119aa    MW: 13674.5 Da    PI: 10.4615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37562genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.1e-16148455
       AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  OIT37562  1 RGIRKRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 48
              8***999.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
RGIRKRKWGK WVAEIREPNK RSRIWLGSYS SPVAAARAYD TAVFYLRGPL AKLNFPQFIV  60
NENHQLHNQL SASDIRKKAT QVGAKVDAML QTATNSTESK WLSMKPDLNE YPSPETWEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.12e-45ERF family protein