PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT37288 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 165aa MW: 19001.6 Da PI: 9.9282 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.1 | 2e-24 | 88 | 149 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg+ WrKYGqK++ ++++pr+YY+Ct + gC++ k+v+r + +p + ++Y+g+H+++ OIT37288 88 VDDGHVWRKYGQKQILDAPYPRHYYKCTNKfdqGCEAIKQVQRIQANPPQFRTIYQGHHTCK 149 59**************************99999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MLAENLVGQI MGSFCKTLSI LKSNNSNEDS QIPVVDVFPC RKDDRTSPED STGSCKKSSS 60 KERRGYNKKR YFNRKILAKS IKETSTLVDD GHVWRKYGQK QILDAPYPRH YYKCTNKFDQ 120 GCEAIKQVQR IQANPPQFRT IYQGHHTCKT YPTVSQMLLD SSNRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 9e-26 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT37288 |