PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37226
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 287aa    MW: 30442 Da    PI: 8.472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37226genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2673.6e-212574255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa+a++aa+++++g
  OIT37226 25 HYRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDAAAREFRG 74
              6********.**********965...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MAMKEKLNGS LKGGNVKTNG VKEVHYRGVR KRPWGRYAAE IRDPSKKSRV WLGTFDTAEE  60
AARAYDAAAR EFRGPKAKTN FPLPSENQCP SNTSVPTESS SGETGVHAPS ELDLTRPLGT  120
VAVGGDHGGR KSEVGLVRNG FPIFHHQPVM GALTSGSSSP VESSSGETGV HAPLELDLTR  180
HLGAVGEGGN HVRNGFPIFH QQPTVAVLPN GQPVLLFDGT FVPTGILNRP KPYGFEPVAV  240
EFNGVSGRVV HSDASSSTAA NENYYGGGGV ARRELNLDLN LAPPMEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-25ERF family protein