PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36930
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 362aa    MW: 41437.1 Da    PI: 4.3885
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36930genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.4e-1070148388
               EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
        B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
               k+l  s    +g+l +p++ a ++ +++     +l+   ++ ++ +v+l  +   ++y+lt+ W++Fv++++Lk +D v+++ ++++
  OIT36930  70 KQL--SEDDITGQLKIPRRLA-HYlQSP-----ELQSDELDEQECQVELVRNMEEDEYYLTGEWEDFVQEQQLKPKDLVIIEISDNQ 148
               555..44444567*******9.663444.....688889999*******88888888*************************76543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEENSGVHEP LLEKDKNDHF QDMAANEICD NFQDIHLSDK SRTASLRIKG NSLGTAWVFR  60
DENGKLFLEK QLSEDDITGQ LKIPRRLAHY LQSPELQSDE LDEQECQVEL VRNMEEDEYY  120
LTGEWEDFVQ EQQLKPKDLV IIEISDNQRL RIDYISDQRA IDNHVLVRRL SRAEVKDLYL  180
RKLSENYSYC GSGLIEIQPV VETKLCSENA DSLKLKLPKK QVEENLNDLP LPAAGGEIAL  240
ALFDPVGNNI VEMKLVHGSE EDGYYIGGGE WKEYAVKHNL LTSDTLFLDK VIVHNDDHEL  300
NNPNAQFSYH YEISYQRGSS KESEKLDAAA ATTTTVGIGD NKKGHNQSEY EGDLESFWLW  360
LV