PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36747
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 290aa    MW: 31995.1 Da    PI: 9.7147
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36747genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.6e-1488132347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
         OIT36747  88 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 132
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSSACCNESS AEAVAAGGAE GEIMLFGVRV KVDPMRKSVS LNNLSQYEQP NANNNNESSK  60
VAEEGYASAD DVVQHQSNSG RERKRGVPWT EEEHKLFLLG LQKVGKGDWR GISRNFVKTR  120
TPTQVASHAQ KYFLRRSNLN RRRRRSSLFD ITTDSVSVMP IEEGKNKQEI PVPAVLTPPT  180
LPTTIEATKT NAFPVVPIML PAQIDQSRES PSLLQRNQVN SYMPVRPVPM LSMPNRSTVV  240
DLNVNQNSEV EPLSLRLSLS LDQGQASSTR HSAFKVMSSF SNGENIISVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141167RRRRRSSLFDITTDSVSVMPIEEGKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.15e-60MYB_related family protein