PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT36670 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 317aa MW: 35855.5 Da PI: 4.9843 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.5e-18 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d + ++ r +lg+f taeeAa+a+++a+ l+g OIT36670 27 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDQAACLLRG 76 799******.7*********32...35**********************99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 317 aa Download sequence |
MEINFQKQQH KEAKVTKLKG RNNRSNKFVG VRQRPSGRWV AEIKDTTQKI RMWLGTFETA 60 EEAARAYDQA ACLLRGSNTR TNFVTRVSVD SPLASRIKNL LDSKKTAKQK SHDQKEQSSA 120 SSATSSHNIN QNTSSVTSNN SNNSSPMITT SYSSNDDSVS SQNIEPIHPL ENPTQVEDYM 180 AYDQTRLSCN QELQLQESQL FDDTYKPDLS NCSDEIDVGY SSSSVSNSFS FTNSSQHEMS 240 WNFARGYEFA QELLDHPKNV ILDETAEMGL TEFERMKMER SISASLYAVN GVQEYIENFY 300 DPSEPLWDLP PLCSLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-29 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT36670 |