PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT36603 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 386aa MW: 43483.2 Da PI: 4.3703 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 134 | 183 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g OIT36603 134 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 183 89*******.**********82....35*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MDHDMLCPIK YTEHRNVIRK VTKPSPIKSK KFPEPQKSNQ YNRSIPPRTV RISVTDPDAT 60 DSSSDEEDEL FGRRRVKKYI NEISIETAVK CEVSMPTSGK TAVKKRAADV LQPKQKPMKV 120 KEVQPPQSAG AVRKFRGVRQ RPWGKWAAEI RDPARRVRLW LGTYDTAEEA AMVYDNAAIK 180 LRGPDALTNF ITPPKPEIDV PSNSGYESGN ESRNIPSPTS VLRFRMSQSS EETEQQSRSE 240 PVQEECPSVQ GPMECEQTVQ DVEPVQGVEP FGLPVKQEME ECQGETSMIP DYSNDYLPTD 300 VPFLEDFFNF EAAEQTLFED TTTGFPNDFG TSYNDTSSSD FVNDFLFNDD FGNFDDSFQD 360 LGTLGVDDYF QDIGADFSSV DSLLAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-55 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT36603 |