PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36521

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 579aa MW: 64466.5 Da PI: 4.8044

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36521	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.9	3.6e-21	238	286	5	54
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLH++F+eav+qL G+ + Pk+ilelm+v+gLt+ +v+SHLQk R OIT36521 238 EWTLELHAKFLEAVAQL-GEGRCYPKEILELMDVPGLTRMQVASHLQKCR 286 7**************.9***************************98 PP
2	Myb_DNA-binding	36.1	1.5e-11	238	285	3	47
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT e++ ++++av+qlG g +k I + m g+t+ q+ s++qk OIT36521 238 EWTLELHAKFLEAVAQLGEGrcYPKEILELMDvPGLTRMQVASHLQKC 285 6*********************************************97 PP
3	Response_reg	34.7	9.5e-13	30	134	1	106
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 v++vd ++ + +le+++y +v+++ +e a+++l + + +D++++ p++ +ll + + + + i+v + +++ +a++al++Ga OIT36521 30 VMLVDHDQETIYEMVDLLESHKY-KVTTVGAAEMAMNMLSKGKerYDVMIINAYSPDLLSTRLLGQAVALD--IISIFVCDDNNPFLAKKALDVGAY 123 8999999999*******.***********777667********98888887776655..88899999999********* PP EEEESS--HHH CS Response_reg 96 dflsKpfdpee 106 +l Kp ++e OIT36521 124 LYLKKPLQEEM 134 ****77654 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MSQQEINNQP NEGLVNPMAP YNGMINEVHV MLVDHDQETI YEMVDLLESH KYKVTTVGAA 60 EMAMNMLSKG KERYDVMIIN AYSPDLLSTR LLGQAVALDI ISIFVCDDNN PFLAKKALDV 120 GAYLYLKKPL QEEMVKYLWQ FVLKEKLQRE KVKKVLENGE NMINIGEDNE TGENVGDEQG 180 ERSIGNDEEQ NNNHEVENSE SNGKYKLRKK RGRKSTKKAN QGDSHSSGKS VKRKVCTEWT 240 LELHAKFLEA VAQLGEGRCY PKEILELMDV PGLTRMQVAS HLQKCRNDNW RAPEERKSSR 300 NSSRQGSSSG SQQRSGHRKF GSMPRIQPNI VTNLQQQQLD QEINQRSPPE FQFPPLNNSN 360 IIAGGESSTQ EEQAYRPQLP YVEPQYLSIG SPFNNPNFTQ NNAGGFVQQQ QQNGPFVGMM 420 GQGQGPIIGG TNYRPGFPIN NGPDHNAQNG YNMNVNAAHL GYSGGPMISD MNGNMTMNGL 480 GFAVAAANAN FQQQFGQPNM TEPNNSNVSD SEGTDSNDGQ NCDQYFDFND VDYLFQNLGP 540 PTSNLPNEQG TEFGPVYSDD QVKPSVPFPG IANFPDDLA

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MSQQEINNQP NEGLVNPMAP YNGMINEVHV MLVDHDQETI YEMVDLLESH KYKVTTVGAA  60
EMAMNMLSKG KERYDVMIIN AYSPDLLSTR LLGQAVALDI ISIFVCDDNN PFLAKKALDV  120
GAYLYLKKPL QEEMVKYLWQ FVLKEKLQRE KVKKVLENGE NMINIGEDNE TGENVGDEQG  180
ERSIGNDEEQ NNNHEVENSE SNGKYKLRKK RGRKSTKKAN QGDSHSSGKS VKRKVCTEWT  240
LELHAKFLEA VAQLGEGRCY PKEILELMDV PGLTRMQVAS HLQKCRNDNW RAPEERKSSR  300
NSSRQGSSSG SQQRSGHRKF GSMPRIQPNI VTNLQQQQLD QEINQRSPPE FQFPPLNNSN  360
IIAGGESSTQ EEQAYRPQLP YVEPQYLSIG SPFNNPNFTQ NNAGGFVQQQ QQNGPFVGMM  420
GQGQGPIIGG TNYRPGFPIN NGPDHNAQNG YNMNVNAAHL GYSGGPMISD MNGNMTMNGL  480
GFAVAAANAN FQQQFGQPNM TEPNNSNVSD SEGTDSNDGQ NCDQYFDFND VDYLFQNLGP  540
PTSNLPNEQG TEFGPVYSDD QVKPSVPFPG IANFPDDLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	234	RKKRGRKSTKKANQGDSHSSGKSVKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-29	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIT36521