PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT36443 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 312aa MW: 35587.7 Da PI: 6.4285 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 112 | 161 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a++k++g OIT36443 112 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDEAALKFKG 161 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MVDRRYGKRP FSSNESEEKE DNTNTTTTTT NEEEPIFPFY SARSQHDMSA MVSVLSQVIG 60 NTTTTNNNTN ISSVNSSVHG INPLTLPQSA GANLQNQSQS IQEQGNQQRK RHYRGVRQRP 120 WGKWAAEIRD PKKAARVWLG TFDTAEAAAI AYDEAALKFK GNKAKLNFPE RVQPKTEFTF 180 LTNSTTQQEF GILGHQFPAT TSINNNLPYF QPNYLSQQHF PNVHHYAQLL RDGNNFEMNS 240 PNFYQQGFVS ESLPNTSLEL QQGTSHEQEQ QVSYNQQQEE DFLRFPFHYG NSNSSTGPNT 300 GESNWEDFER RK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 2e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT36443 |