PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT36427 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 98aa MW: 11470.7 Da PI: 8.8142 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.9 | 1.2e-08 | 6 | 52 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT + +l+ +a + + + +W+ a+ +g g++++++k ++ k+ OIT36427 6 TWTHQQNKLFENALAIYDREtpdRWRNLAKAVG-GKSEEEVKRHYEKL 52 7*****************88*************.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MASNSTWTHQ QNKLFENALA IYDRETPDRW RNLAKAVGGK SEEEVKRHYE KLVEDIKHIE 60 SGNVALPNYN KANNGGHSNY KGYNFMDEEQ RLKYLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 3e-33 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT36427 |