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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT36248 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | BES1 | ||||||||
| Protein Properties | Length: 327aa MW: 35225.1 Da PI: 7.8235 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 211.2 | 2.7e-65 | 2 | 145 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kp ++++++g sas+sp+ss+q
OIT36248 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEDDGTTYRKGCKPVHHMDVIGGSASVSPCSSYQ------ 96
5899*******************************************************************************************...... PP
DUF822 102 alaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
sp +sy++sp+sss+psp+s+ i + ++ +sl+p+l++ls+ ss
OIT36248 97 --LSPGASYNPSPASSSIPSPVSSHYIANVQNnsdpNSLIPWLKNLSSGSS 145
..788888888888888888888877655444567799*******998443 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 327 aa Download sequence |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WIVEDDGTTY RKGCKPVHHM DVIGGSASVS PCSSYQLSPG ASYNPSPASS SIPSPVSSHY 120 IANVQNNSDP NSLIPWLKNL SSGSSPSSSN FPHHLCIPGD SISAPVTPPS SSPTARTPRM 180 NDNWENPTAN STWIQHHYPF LPFSTPPSPG GRQTPPDSGW LSGVQTPQDG PSSPTFSLVS 240 SNPFGFKEPL SNGGSRMWTP GQSGTCSPAV GAGMDQTADI PMSDVISAEF AFGSNVKGVV 300 KPWEGERIHE ECVSDDLELT LGNSSTR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G78700.1 | 1e-99 | BES1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT36248 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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