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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT36189 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | HSF | ||||||||
| Protein Properties | Length: 321aa MW: 36163.6 Da PI: 5.5505 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 111.8 | 4.6e-35 | 12 | 104 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
F+ k+y++++d++++ li w +++nsf+v+++ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+++ll++i
OIT36189 12 FVLKTYQMVNDPKIDGLIAWGRENNSFIVVEPLDFSQRILPIYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEWFLRGQTHLLKNIV 99
9********************999*****************************************999.........******************** PP
XXXXX CS
HSF_DNA-bind 99 rkkse 103
r+k++
OIT36189 100 RRKHS 104
*9976 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 321 aa Download sequence |
MEANSNNIVA PFVLKTYQMV NDPKIDGLIA WGRENNSFIV VEPLDFSQRI LPIYFKHNNF 60 SSFVRQLNTY GFRKVDPDKW EFANEWFLRG QTHLLKNIVR RKHSRNSYCL KQDESEDEEI 120 YTEIARLKQE QKTLEQEVEN MTKRLEATEK RPQQMMAFLC KVVDDPEILP RILLEKERSK 180 RVSLNNSEKK RRIMISNNST SCSSVKSEEE VGDPLIGAIS SFRSPDANFD KDTLCQSSPS 240 SETPTTVWLS GRPMITYEPY RSCPAMSGSL SSGSSEGGGF TTAPSSEAFS GYDYGGRGGG 300 SVAAEEVSPP PYPFSLLGGG F |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G24520.1 | 2e-90 | HSF family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT36189 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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