PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36147
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 267aa    MW: 29891.4 Da    PI: 4.4896
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36147genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB73.92.6e-23890385
     NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
              ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c+re+++ti+++ +l al  lGf +y+e++ +
  OIT36147  8 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREDKRTIAPEHVLKALEVLGFGEYIEEVYA 90
              6899***************************************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDIVGKSKED ASLPKATMTK IIKEMLPPDV RVARDAQDLL IECCVEFINL ISSESNEVCN  60
REDKRTIAPE HVLKALEVLG FGEYIEEVYA AYEQHKLETM DTVRSGKCNN VAEMTEEEAL  120
AEQQRMFAEA RARMNGGVTG PPKQQDSEAE QQRMFAEARA RMNGDVTGPT KQQDPETEQQ  180
RMFAEARARM NDDVTGPTKQ QDSETEQQRM FAEALVRMNG NVTGLPKQQD SEAEQRKMFA  240
EAHAMMNGGV TGPPKEQDSE AKQNVNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.43e-91NF-YB family protein