PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36098
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 395aa    MW: 43237.8 Da    PI: 6.903
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36098genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-174695255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  OIT36098 46 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 95
              69*******.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEDAMRRLNQ ESDIPLQTTT YTTKRSCGAN KRSLKDGGGS SVGAVRYRGV RRRPWGRYAA  60
EIRDPQSKER RWLGTFDTAE EAACAYDCAA RAMRGVKART NFVYPPSPTQ PTSTNDGLTF  120
LNIPNSFNYT CAKSFPYQAA LKDLSNRQFL HSSNYLPSYG SSIRGVNGTT VATATQKSND  180
SLNMLLFREL LSSNSSNTTT TSLSSDTGFN NNMPLYEQLP LMFSRNNTSI GLNSSTSNLM  240
NHTSSSSTFL PTTSNANIPS SSVMTLPKIE NVHSLNNNST CIDDDSGMDF FPSEPSDSGL  300
LEEALNGFFP KPKPSKSEPF PSSSKGELSG VCNIPQQIND GLNSGFEFSQ TSSSFPMYHQ  360
DFAANLQVSS GDNMMGDIFQ YPDLLNIFAA KLQNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-13ERF family protein