PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35879

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 653aa MW: 74971.6 Da PI: 6.4327

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35879	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.5e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv +yLk+k++gkk+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + + OIT35879 6 LPPGFRFHPTDEELVAYYLKRKINGKKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QMRS 104 79**************************.99***********6434555777**********************************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLv+y+grap+g +tdWvmheyrl OIT35879 105 VGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING KKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRSVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECQV SNGLQDAYAL CRVIKRSLNG PKTGDVHYAS DRSSSIEIYS 180 EGRCDHHDME IRSHEYGMPS SSSSSMAVHG SPMNVATPTP SDDKWNMQYL SNEALSFNNS 240 QLVPNYGTLP YPPSKVNIAL ECARLQHRFA LPPLEIQDFP QVGYVDTKMP QSNFTQSTNQ 300 TDIVEEILSV AQASQNLINQ DLSWGGNSCA PVDNFSFLPP NDNNQIHDLD SFHFMEQLKE 360 DQNVRSIDIG DFGVDFKSDR MVENLRWIGM SDRDLEKTFL EDYKTVPIEN VSAVQREENQ 420 LQGEYSGHHN IFNGFIETET NNFSIALGSD NLLDDGDITD GLSNSPSFEI YEKIEVNHGF 480 FIATRQAAKT FYHQVTPSTT LRIHRNLVTV HDFPIYIGKI SDSTAIIPKE RTFLDNFIKK 540 VRRPWTTTMR TLASMVALLH VIFWICFGEC LDEKGSKLEN KRGVSVNREC LMEREEKKKA 600 QDYKWDCYKQ NKLPIADKEE EKYCNVAVEK KWPYLTLVVA LSTIWLHHIV PSF

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING KKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRSVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECQV SNGLQDAYAL CRVIKRSLNG PKTGDVHYAS DRSSSIEIYS  180
EGRCDHHDME IRSHEYGMPS SSSSSMAVHG SPMNVATPTP SDDKWNMQYL SNEALSFNNS  240
QLVPNYGTLP YPPSKVNIAL ECARLQHRFA LPPLEIQDFP QVGYVDTKMP QSNFTQSTNQ  300
TDIVEEILSV AQASQNLINQ DLSWGGNSCA PVDNFSFLPP NDNNQIHDLD SFHFMEQLKE  360
DQNVRSIDIG DFGVDFKSDR MVENLRWIGM SDRDLEKTFL EDYKTVPIEN VSAVQREENQ  420
LQGEYSGHHN IFNGFIETET NNFSIALGSD NLLDDGDITD GLSNSPSFEI YEKIEVNHGF  480
FIATRQAAKT FYHQVTPSTT LRIHRNLVTV HDFPIYIGKI SDSTAIIPKE RTFLDNFIKK  540
VRRPWTTTMR TLASMVALLH VIFWICFGEC LDEKGSKLEN KRGVSVNREC LMEREEKKKA  600
QDYKWDCYKQ NKLPIADKEE EKYCNVAVEK KWPYLTLVVA LSTIWLHHIV PSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-147	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT35879