PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT35816 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 129aa MW: 14991.8 Da PI: 4.8063 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.6 | 4e-12 | 26 | 106 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+ v ++ ++ + + l++p+k +h + +++ l + +g++W v + + +++r +++GWk Fv +n++k+g +v F+l++ s+ OIT35816 26 FEVV-MTDSYINYDDLYIPRKIY-KHLPP---TVETALLHYRGKEWFVSM--SVGDRR-RFKEGWKLFVLDNNVKQGFVVKFTLVDVSS 106 4444.5666666667*******9.66323...3579999***********..555444.4899********************987555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
DASHSTKRCL TYSCTSEDEE ENPPTFEVVM TDSYINYDDL YIPRKIYKHL PPTVETALLH 60 YRGKEWFVSM SVGDRRRFKE GWKLFVLDNN VKQGFVVKFT LVDVSSLYVD FNVEVKGEGT 120 HDCNPVEID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06160.1 | 2e-08 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT35816 |