PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35457

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 506aa MW: 56022.7 Da PI: 6.5847

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35457	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.8e-30	233	292	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ OIT35457 233 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 292 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MENNKSESDE MEIDLSLKLD SREEEIDEEN QSSQLVNAKT QGKDQELSKA ETSGSSKTEE 60 LSMLQTEMNK MKEENKFLRK AVEQTMKDYY DLQAKFAVIH QNNHEKDHRN FLSLSGNDDT 120 TEGLTWSPKI LDIKNRTLSQ TSQELDDIMD GDQLGLSLTL VSSNSSITTN KLVESTELEE 180 RKEKIKEDNA AITTQIQNKG NLQGGLTNHV TTASPPNRKA RVSVRARCES ATMNDGCQWR 240 KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI LITTYEGTHN HPLPVGATAM 300 ASTTSAAASF MLVDSSINPL LNQAVNFPNY HNNSPNYSHR IPNSSSSSSP YFSNLRNNIL 360 NSSDPNIVLD LTKNISNDHH HQFPFVSSSS NSSAATATTN QLSQYSWMPK LPNNNYDGNS 420 NTIVNNLFTS PKLQGDHHHH HHHHQNSSSN PILAENMSAI ASDPKFRVAV AAAISSLINK 480 DQSHPISTSS LGDHGESNGG SVRHSQ

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MENNKSESDE MEIDLSLKLD SREEEIDEEN QSSQLVNAKT QGKDQELSKA ETSGSSKTEE  60
LSMLQTEMNK MKEENKFLRK AVEQTMKDYY DLQAKFAVIH QNNHEKDHRN FLSLSGNDDT  120
TEGLTWSPKI LDIKNRTLSQ TSQELDDIMD GDQLGLSLTL VSSNSSITTN KLVESTELEE  180
RKEKIKEDNA AITTQIQNKG NLQGGLTNHV TTASPPNRKA RVSVRARCES ATMNDGCQWR  240
KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI LITTYEGTHN HPLPVGATAM  300
ASTTSAAASF MLVDSSINPL LNQAVNFPNY HNNSPNYSHR IPNSSSSSSP YFSNLRNNIL  360
NSSDPNIVLD LTKNISNDHH HQFPFVSSSS NSSAATATTN QLSQYSWMPK LPNNNYDGNS  420
NTIVNNLFTS PKLQGDHHHH HHHHQNSSSN PILAENMSAI ASDPKFRVAV AAAISSLINK  480
DQSHPISTSS LGDHGESNGG SVRHSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	4e-71	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT35457