PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35361
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 189aa    MW: 21006.6 Da    PI: 4.3027
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35361genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB76.63.7e-241199391
     NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
              ++d+ lP a +++i+k++lP + ++++d+++++ ec +efi +++se+++ c+re+r+ti+++ +l al  lGf +y+e++ +  +++r
  OIT35361 11 KEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLISSESNEVCNREERRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHR 99
              6899***************************************************************************9987666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEPMDIVGKN KEDASLPKAT MTKIIKEMLP PDVRVARDTQ DLLIECCVEF INLISSESNE  60
VCNREERRTI APEHVLKALE VLGFGEYIEE VYAAYEQHRL ETMDTVRSGR CSNGAAMTEE  120
EALAEQQRMF AEARARMNGS ATVPAKQPDL EEALAEQQRM YAEAHAGMNG GVTVPSKQPD  180
SEADQDLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-90NF-YB family protein