PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34870
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 297aa    MW: 32932.8 Da    PI: 8.1093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34870genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-19121170255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++  +++++g
  OIT34870 121 QYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDIEARRIRG 170
               69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MCGGAIISDC IPPPRSSRRL TADLLWGCSN LNNKKKKKNP FNYQYSKPLR SEVVDFDYDD  60
FEADFQDFKD CSDDEVDELK PLAAFSASEQ SGGTSAGSKS LKSVDPDKEV EKSSKRKRKN  120
QYRGIRQRPW GKWAAEIRDP QKGVRVWLGT FNTAEEAARA YDIEARRIRG KKAKVNFPDE  180
APVAASRQAG KVNPLTVLPK ASSNPVLSDA TFVNNLDDGC YEKLGFFEEK PTKNLYGYDD  240
LCPTPGDLGP NSYALPAAAG VYFNSDQGSN SFEPSDFGWG VFKDTRNIIC SVGCCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.33e-45ERF family protein