PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34682
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 399aa    MW: 44961.8 Da    PI: 7.3727
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34682genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.63.8e-2280139357
               --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  OIT34682  80 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 139
               7*****************99**************************************97 PP

2Wus_type_Homeobox115.42.8e-3779141365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
           OIT34682  79 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 141
                        79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MWMMGYNDGG DFNMQDSFNG RKLRPLMPRV PHLPTANIST NPTCLRSIHG ENFIALNHHQ  60
LAMSEQNKRD FNTQQLVVSS RWNPTPEQLQ TLEELYRRGT RTPSAEQIQH ITAQLRRYGK  120
IEGKNVFYWF QNHKARERQK RRRQLESAAG GSAANAGGGG DDQSRSNCNA ENTERKESGA  180
NRTGFEIEQT KNWPSPTNCS TLAEKTVATK KAAAAAGVAE CRVAAERWIP FDEGEQRRSL  240
LLADQRNATW QMMHLSCSPP TTTTPHHHLM NINSSTAAIS NTISATSSPI ICCSSTPSTP  300
RTTMEPKQLF KTKDHLNIFI APFRTDIRKH DNMENIVGDE AQEESQTLEL FPLRSSNDNN  360
DDNNFSEKDE VEISGANDNS NSNFSGSHYQ FFEFLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.18e-58WOX family protein