PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT34682 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WOX | ||||||||
Protein Properties | Length: 399aa MW: 44961.8 Da PI: 7.3727 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.6 | 3.8e-22 | 80 | 139 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ OIT34682 80 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 139 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.4 | 2.8e-37 | 79 | 141 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ OIT34682 79 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 141 79***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
MWMMGYNDGG DFNMQDSFNG RKLRPLMPRV PHLPTANIST NPTCLRSIHG ENFIALNHHQ 60 LAMSEQNKRD FNTQQLVVSS RWNPTPEQLQ TLEELYRRGT RTPSAEQIQH ITAQLRRYGK 120 IEGKNVFYWF QNHKARERQK RRRQLESAAG GSAANAGGGG DDQSRSNCNA ENTERKESGA 180 NRTGFEIEQT KNWPSPTNCS TLAEKTVATK KAAAAAGVAE CRVAAERWIP FDEGEQRRSL 240 LLADQRNATW QMMHLSCSPP TTTTPHHHLM NINSSTAAIS NTISATSSPI ICCSSTPSTP 300 RTTMEPKQLF KTKDHLNIFI APFRTDIRKH DNMENIVGDE AQEESQTLEL FPLRSSNDNN 360 DDNNFSEKDE VEISGANDNS NSNFSGSHYQ FFEFLPLKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 8e-58 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT34682 |