PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34679
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 395aa    MW: 43345 Da    PI: 5.1128
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34679genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.71.4e-15148194455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                hn  E+rRR riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  OIT34679 148 VHNLSEKRRRGRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 194
               6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MANNNIYHHN ANTCFSFTEP DPEPDDISVF LRHILHPSSN FMTHEMQDTS SLPHLLPKNQ  60
HCLGISDGEL SSVLNSSGGG VFSSSYGAYN VPASVANVSS SSVGTMDNDP DEYECESEGG  120
TEDLGVEVSA QPPPPSNTNS KRSRAAEVHN LSEKRRRGRI NEKMKALQNL IPNSNKTDKA  180
SMLDEAIEYL KQLQLQVQML TMRNGLSMYP LGLPRVLQQN QVSQLSMGLC EGNGYTNAKA  240
AGALHVNQDT SLNAIFCSGD NRTETKLTPV ATMSNVNHSN NAFESESSIN VHLDPFQLSR  300
STSNGTLRED WLPLHEMGER QTKTVSIGEN VASSVPFDAS ELKRNTLEAC LRRYQFGAMS  360
ETNMDCDQFL APQLYSHAGR STSVDTIIKT ECSNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-41bHLH family protein