PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34608
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 347aa    MW: 38879 Da    PI: 10.1438
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34608genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.61.9e-31281338359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  OIT34608 281 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 338
               9************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MEEIEEANRV AVESCHRVVS LLTQQHDQKQ YGNLVRETGE AVHKFNKVVT LLNSNLGHAR  60
VRKAKKILTP FPQNLLLENP SYKIDDQPKA LQLLPVKSPE TPVQEIGSNV KSTLTLGYPS  120
LELSSHSKSP LHLAQQTPSS SFHFAQQQQQ QQRLKYQLQQ QQLKQQADMM YRRSNSGISL  180
NFDSSTCTPT MSSTRSFISS LSIDGSVANL DGNAFHLIGA SRSADQSSFQ QKRRCSGKGE  240
EGSVKCGSSS RCHCSKKRKH RVKRSVKVPA ISNKLADIPP DEYSWRKYGQ KPIKGSPHPR  300
GYYKCSSMRG CPARKHVERC LEEPSMLIVT YEGEHNHPRL PSQSANA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-101WRKY family protein