PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT34558 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 25527.8 Da PI: 9.3622 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 2e-20 | 28 | 78 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp gk+ r++lg+f+tae+Aa+a++aa+++++g+ OIT34558 28 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEDAARAYDAAAREFRGA 78 6********.**********8...557*************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MAPKEKGTAA MPTVTAAGKV NGVSKEVHYR GVRKRPWGRY AAEIRDPGKK SRVWLGTFDT 60 AEDAARAYDA AAREFRGAKA KTNFPILEPE IVKLPNGNRS PSQSSTVENS PPVMPENSPP 120 AVMLDASPLN LSLGGSGSLF SNGVGRFLFQ NHLFHGSPVA GGMTPVNHVY YLEALQREQV 180 ISSYQKSCRK TAEFIAGCGG GASGESDSSS VIDFMGHDLK PTTRPINLDL NLPPPENM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15210.1 | 2e-32 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT34558 |