PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34213
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 358aa    MW: 39232.8 Da    PI: 7.4334
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34213genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30167226159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a gCpvkkkv+rs ed+++v+ tYegeHnh+
  OIT34213 167 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApGCPVKKKVQRSIEDQSIVVATYEGEHNHP 226
               58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEFTSLVDTS LDLSFRPLPG LDKMAKQEVQ SNFTGLSRDN MLVKDEAGDL LEELNRVSSE  60
NKKLTEMLTV VCENYNALRN QLMEYMNNQN NGVVDDSAGS RKRKAENISN PNNNNKNNNL  120
DIVCGRSSES SSSDEESCCK KPREEDIKTK VSVVSMKTEA SDTSLIVKDG YQWRKYGQKV  180
TRDNPSPRAY FRCSFAPGCP VKKKVQRSIE DQSIVVATYE GEHNHPIHPS KPEAAAAAAA  240
STTSAGSRLN VRTIGGTTAS VPCSTTLNPS GPTITLDLTE SKTVAKGDIM KMSSSISPTG  300
GNSHRTTEAD QYHDRPELQQ FLIEQMASSL TKDPSFKAAL AAAISGKILQ HNNQTSRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-90WRKY family protein