PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT34117

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 380aa MW: 42444.1 Da PI: 7.7186

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT34117	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.2e-39	109	169	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k ++cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrk+k+ss OIT34117 109 PDKLVPCPRCNSMETKFCYYNNYNVNQPRYFCKNCQRYWTAGGTMRNVPVGSGRRKHKSSS 169 78999****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MSEVRDPEIK LFGQTIGLTQ ERGLWNRKSS SYSTSTASNE DKITSKGEFT QSKQDNELVD 60 PTVDSLVEPE TSSGLSDELK IHDADKETLS PKSVEEEDSS DQEKTLKKPD KLVPCPRCNS 120 METKFCYYNN YNVNQPRYFC KNCQRYWTAG GTMRNVPVGS GRRKHKSSST SNYGMHLPAL 180 RANGIVLTFG SDEPLCDSMA GNDQSNGVCS TSSVLTEKEN YSSTHDWKNF QAFHPQVPYL 240 QGAPWPYSGF PVSFYPAPAY WGCTVANSWN VRWLSSDQSV HNTGPGSPTL GKHPREREGE 300 RCVLIPKTLR IDDPKEAAKS SIWSTLGIKN EKIDSVRGAR LLKAFNTKAD HRNRESDASF 360 VLQANPAALS RSLNFRESTQ

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MSEVRDPEIK LFGQTIGLTQ ERGLWNRKSS SYSTSTASNE DKITSKGEFT QSKQDNELVD  60
PTVDSLVEPE TSSGLSDELK IHDADKETLS PKSVEEEDSS DQEKTLKKPD KLVPCPRCNS  120
METKFCYYNN YNVNQPRYFC KNCQRYWTAG GTMRNVPVGS GRRKHKSSST SNYGMHLPAL  180
RANGIVLTFG SDEPLCDSMA GNDQSNGVCS TSSVLTEKEN YSSTHDWKNF QAFHPQVPYL  240
QGAPWPYSGF PVSFYPAPAY WGCTVANSWN VRWLSSDQSV HNTGPGSPTL GKHPREREGE  300
RCVLIPKTLR IDDPKEAAKS SIWSTLGIKN EKIDSVRGAR LLKAFNTKAD HRNRESDASF  360
VLQANPAALS RSLNFRESTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-82	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT34117