PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34050
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 281aa    MW: 31298.9 Da    PI: 9.7938
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34050genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.8e-30152209359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D+++WrKYGqK++kgs++pr+YY+C+s+ gC ++k+v+r+++dp++++itY++eH+h+
  OIT34050 152 DKWAWRKYGQKPIKGSPYPRGYYKCSSSkGCLARKQVDRNRSDPNMFNITYTSEHDHP 209
               99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEADWDLHAV VRGCTATAAT NTTTSSSSSS SSTITTISNS TNVHQVDNFI CFQDSFEPKF  60
DTTNAVQELH SLYKPFVNGG LQDLSTHQTL KHQQNLHNHQ LITGLIQPKH FTTSKTSTSR  120
RTSYPQMSPR IQKRKNKLKK VCQLPAEALS LDKWAWRKYG QKPIKGSPYP RGYYKCSSSK  180
GCLARKQVDR NRSDPNMFNI TYTSEHDHPM PTHRSSLAGI ARQKPVNSKA SSTGETNKPS  240
TSSPACLSPV PENQECSKED KEDSFDAVSD GGNWQIRPKP P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-54WRKY family protein